Run Rclade self-test

Performs comprehensive self-check:

1. Required package availability and versions

2. Example tree parsing and taxonomy extraction

3. Monophyly logic validation

Usage

run_rclade_selftest(verbose = TRUE)

Arguments

verbose

Logical. If TRUE (default), progress and results are reported via message (suppressible with suppressMessages). If FALSE, the self-test runs silently and only the exit code is returned.

Value

Integer. Exit code (0 = all passed, 1 = failures).